BME Advanced Imaging [399-650B]

First meeting: Friday, January 11, 2002 at 1:30 in room 321 of the Lyman-Duff Medical Sciences Building.

Rationale: Approximately 30-50 graduates students work within the medical imaging community at McGill. The current Physics of Medical Imaging course (563-607B) provides the basis for the understanding of modern medical imaging technologies but does not cover advanced techniques that are used in most state-of-the-art medical imaging modalities, particularly for research. This course is designed to provide graduate students in the medical imaging discipline with a comprehensive treatment of most major imaging technologies at an advanced level.

Course Summary: Review of advanced techniques in medical imaging including: image processing techniques (classification, segmentation, rendering), fast magnetic resonance imaging (MRI), functional MRI, MR angiography and quantitative flow measurement, spiral and dynamic x-ray computed tomography, 2D/3D positron emission tomography (PET), basic PET physiology, surgical planning and guidance, functional and anatomical brain mapping, ultrasound imaging, and medical image processing.

Credits: 3

Lectures: 3 hours per week

Prerequisite: Physics of Medical Imaging (563-607B) or equivalent.

Reference list: Handouts. Journal review papers: IEEE Transactions on Medical Imaging, Magnetic Resonance in Medicine, Journal of Magnetic Resonance Imaging, Journal of Computed Assisted Tomography, Medical Physics, Journal of Cerebral Blood Flow and Metabolism, etc. Texts: The Physics of Medical Imaging, S. Webb, Institute of Physics Publishing, The Physics of Magnetic Resonance Imaging, Michael J. Bronskill and Perry Sprawls, American Association of Physicists in Medicine Medical Physics Monograph.

Grading: Course project with 15-20 page report (1.5 line spacing, plus references and figures) and class presentation. Reports and presentations may be in French or English.

Interesting links:

Tentative Schedule:

date speaker topic (w/links to notes)
11-Jan-02 Collins Course Intro + Linear Registration
15-Jan-02 Collins Non-linear Registration, Classification, Segmentation
22-Jan-02 Collins Surface/Volume rendering
29-Jan-02 Collins Brain mapping / Surgery Planning (IGNS)
05-Feb-02 Pike MRI review, fMRI, MRA
12-Feb-02 Pike Spiral, MT, quantitative T2
19-Feb-02 Meyer/Evans PET Physics (2D/3D)
26-Feb-02 No class Spring Break
04-Mar-02 Arnold MR spectroscopy
11-Mar-02 Gotman EEG
18-Mar-02 Soualmi Ultrasound
25-Mar-02 Paus TMS/Functional Activation Study Design
01-Apr-02 Dahger Physiological kinetic modeling
date student topic
tba tba tba

Course Director: Prof. L. Collins

E-mail: louis@bic.mni.mcgill.ca
Office Phone: (514) 398-4227 or -1996
Office FAX: (514) 398-2975 or -8948
Office address:

Last modified: Jan 5, 2002 Comments or suggestions to louis@bic.mni.mcgill.ca