Papers in peer-reviewed conference proceedings

1

S. Marrett, A. Evans, D. L. Collins, and T. Peters, ``Volume of interest (VOI) atlas for the analysis of neurophysiological image data,'' in Proceedings of SPIE Medical Imaging, (Newport Beach, California), pp. 467-477, SPIE, Jan. 29 - Feb. 3 1989.

2

A. Evans, S. Marrett, D. L. Collins, and T. Peters, ``Anatomical-functional correlative analysis of the human brain using three dimensional imaging systems,'' in Proceedings of SPIE Medical Imaging, vol. 1092, (Newport Beach, California), pp. 264-274, SPIE, Jan. 29 - Feb. 3 1989.

3

C. Henri, D. L. Collins, T. Peters, A. Evans, and S. Marrett, ``Three-dimensional interactive display of medical images for stereotactic neurosurgery planning,'' in Proceedings of SPIE Medical Imaging, vol. 1092, (Newport Beach, California), pp. 67-74, SPIE, Jan. 31 - Feb. 3 1989.

4

C. J. Henri, G. B. Pike, D. L. Collins, and T. M. Peters, ``Three-dimensional display of cortical anatomy and vasculature: MR angiography versus multi-modality integration,'' in Proceedings of SPIE Medical Imaging, vol. 1232, pp. 172-182, SPIE, Feb. 4-5 1990.

5

C. J. Henri, D. L. Collins, and T. M. Peters, ``Reconstruction of 3-D branching structures,'' in Proceedings of the Annual Symposium on Information Processing in Medical Imaging (IPMI) (A. C. F. Colchester and D. J. Hawkes, eds.), Heidelberg: Springer, 1991.

6

A. C. Evans, W. Dai, D. L. Collins, P. Neelin, and T. Marrett, ``Warping of a computerized 3-D atlas to match brain image volumes for quantitative neuroanatomical and functional analysis,'' in Proceedings of the International Society of Optical Engineering: Medical Imaging V, vol. 1445, (San Jose, California), pp. 236-246, SPIE, 27 February - 1 March 1991.

7

A. C. Evans, P. Neelin, S. Marrett, E. Meyer, W. Dai, and D. L. Collins, ``Combined stereotactic mapping of MRI and PET studies of cognitive activation in human brain,'' IEEE Transactions on Engineering in Medicine and Biology, vol. 13, no. 1, pp. 224-226, 1991.

8

D. L. Collins, W. Dai, T. M. Peters, and A. C. Evans, ``Model-based segmentation of individual brain structures from MRI data,'' Visualization in Biomedical Computing 1992: Proc SPIE, vol. 1808, pp. 10-23, 1992.

9

D. L. Collins, T. M. Peters, and A. C. Evans, ``Multiresolution image registration and brain structure segmentation,'' in Proceedings of the IEEE Symposium on Advanced Medical Image Processing in Medicine, pp. 105-110, 1992.

10

C. J. Henri, D. L. Collins, and T. M. Peters, ``Towards frameless stereotaxy: Anatomical-vascular correlation,'' in Proceedings of the Second Conference on Visualization in Biomedical Computing (R. A. Robb, ed.), vol. 1808, pp. 10-23, SPIE, 1992.

11

M. Kamber, D. L. Collins, R. Shinghal, G. S. Francis, and A. C. Evans, ``Model-based 3D segmentation of multiple sclerosis lesions in dual-echo MRI data,'' in Proceedings of the Second Conference on Visualization in Biomedical Computing (R. A. Robb, ed.), vol. 1808, pp. 590-600, SPIE, 1992.

12

M. Kamber, R. Shinghal, A. C. Evans, D. L. Collins, and G. S. Francis, ``Knowledge-based interpretation of magnetic resonance images: Detecting multiple sclerosis lesions,'' in Proceedings of the 4th Conference on Artificial Intelligence in Medicine Europe, (Munich), pp. 32-43, October 1994.

13

D. L. Collins, T. M. Peters, and A. C. Evans, ``An automated 3D non-linear deformation procedure for determination of gross morphometric variability in human brain,'' in Proceedings of the International Conference on Visualization in Biomedical Computing, vol. 2359, pp. 180-190, SPIE, 1994.

14

D. L. Collins, A. C. Evans, C. Holmes, and T. M. Peters, ``Automatic 3D segmentation of neuro-anatomical structures from mri,'' in Proceedings of the Annual Symposium on Information Processing in Medical Imaging (IPMI) (Y. Bizais, C. Barillot, and R. DiPaola, eds.), (Brest, France), pp. 139-152, IPMI, Kluwer, Aug 1995.

15

D. L. Collins, G. LeGoualher, R. Venugopal, Z. Caramanos, A. C. Evans, and C. Barillot, ``Cortical constraints for non-linear cortical registration,'' in Proceedings of the International Conference on Visualization in Biomedical Computing (K. Höene, ed.), pp. 307-316, SPIE, 1996.

16

D. L. Collins, G. LeGoualher, and A. C. Evans, ``Non-linear cerebral registration with sulcal constraints,'' in First International Conference on Medical Image Computing and Computer-Assisted Intervention, pp. 974-984, 1998.
abstract no. 92.

17

G. LeGoualher, D. L. Collins, C. Barillot, and A. C. Evans, ``Automatic identification of cortical sulci using a 3d probabilistic atlas,'' in First International Conference on Medical Image Computing and Computer-Assisted Intervention, vol. 1496 of Lecture Notes in Computer Science, p. 509, 1998.
abstract no. 91.

18

D. L. Collins, A. P. Zijdenbos, W. F. C. Barré, and A. C. Evans, ``ANIMAL+INSECT: Inproved cortical structure segmentation,'' in Proc. of the Annual Symposium on Information Processing in Medical Imaging (A. Kuba, M. Samal, and A. Todd-Pokropek, eds.), vol. 1613 of LNCS, pp. 210-223, Springer, 1999.

19

D. L. Collins, J. Montagnat, A. P. Zijdenbos, A. C. Evans, and D. L. Arnold, ``Automated estimation of brain volume in multiple sclerosis with BICCR,'' in Proc. of the Annual Symposium on Information Processing in Medical Imaging (M. F. Insana and R. M. Leahy, eds.), vol. 2082 of LNCS, pp. 141-147, Springer, 2001.

20

$\dagger$ S. Bouix, J. Pruessner, D. L. Collins, and K. Siddiqi, ``Hippocampal shape analysis using medial surfaces,'' in Proceedings of the 2001 Medical Image Computing and Computer-Assisted Intervention Conference, (Utrecht, Netherlands), pp. 33-40, October 2001.

21

*. S. Duchesne and D. L. Collins, ``Analysis of deformation fields for appearance-based segmentation,'' in Proceedings of the 2001 Medical Image Computing and Computer-Assisted Intervention Conference, (Utrecht, Netherlands), pp. 1189-1190, October 2001.

22

*. S. Duchesne, J. Pruessner, and D. L. Collins, ``Appearance-based modelling and segmentation of the hippocampus from mr images,'' in Proceedings of the 23rd Annual Conference of the IEEE Engineering in Medicine and Biology Society, (Istanbul, Turkey), October 2001.

23

*. T. Arbel, X. Morandi, R. Comeau, and D. L. Collins, ``Automatic non-linear mri-ultrasound registration for the correction of intra-operative brain deformations,'' in Proceedings of the 2001 Medical Image Computing and Computer-Assisted Intervention Conference, (Utrecht, Netherlands), pp. 913-922, October 2001.

24

P. Hellier, C. Barillot, I. Corouge, B. Gibaud, G. L. Goualher, D. L. Collins, A. C. Evans, G. Malandain, and N. Ayache, ``Retrospective evaluation of inter-subject brain registration,'' in Proceedings of the 2001 Medical Image Computing and Computer-Assisted Intervention Conference, (Utrecht, Netherlands), pp. 258-265, October 2001.

25

*. S. Duchesne., N. Bernasconi, A. Bernasconi, and D. L. Collins, ``On the classification of temporal lobe epilepsy using mr image appearance,'' vol. vol.1 of Proceedings 16th International Conference on Pattern Recognition, (Quebec City, Que., Canada), p. 520, IEEE Comput. Soc, 2002.

26

*. S. Prima, N. Ayache, A. Janke, S. J. Francis, D. L. Arnold, and D. L. Collins, ``Statistical analysis of longitudinal mri data: Applications for detection of disease activity in ms,'' in Medical Image Computing and Computer-Assisted Intervention - MICCAI 2002, 5th International Conference, Tokyo, Japan, September 25-28, 2002, Proceedings, Part I (T. Dohi and R. Kikins, eds.), vol. 2488 of Lecture Notes in Computer Science, pp. 363-371, Springer, 2002.

27

*. S. Duchesne, N. Bernasconi, A. Janke, A. Bernasconi, and D. L. Collins, ``Temporal lobe epilepsy lateralization based on mr image intensity and registration features,'' in Medical Image Computing and Computer-Assisted Intervention - MICCAI 2003, 6th International Conference, Montréal, Canada, November 15-18, 2003, Proceedings, Part II (R. E. Ellis and T. M. Peters, eds.), vol. 2879 of Lecture Notes in Computer Science, pp. 367-374, Springer, 2003.

28

*. S. Prima, D. L. Arnold, and D. L. Collins, ``Multivariate statistics for detection of ms activity in serial multimodal mr images.,'' in Medical Image Computing and Computer-Assisted Intervention - MICCAI 2003, 6th International Conference, Montréal, Canada, November 15-18, 2003, Proceedings, Part II (R. E. Ellis and T. M. Peters, eds.), vol. 2879 of Lecture Notes in Computer Science, pp. 663-670, Springer, 2003.

29

J.-F. Mangin, F. Poupon, D. Rivière, A. Cachia, D. L. Collins, A. C. Evans, and J. Régis, ``3d moment invariant based morphometry.,'' in Medical Image Computing and Computer-Assisted Intervention - MICCAI 2003, 6th International Conference, Montréal, Canada, November 15-18, 2003, Proceedings, Part II (R. E. Ellis and T. M. Peters, eds.), vol. 2879 of Lecture Notes in Computer Science, pp. 505-512, Springer, 2003.

30

J.-F. Mangin, D. Rivière, A. Cachia, D. Papadopoulos-Orfanos, D. L. Collins, A. C. Evans, and J. Rgis, ``Object-based strategy for morphometry of the cerebral cortex,'' in Proceedings of the Annual Symposium on Information Processing in Medical Imaging (IPMI), vol. 2732 of Lecture notes in computer science, pp. 160-171, Springer, 2003.

31

$\dagger$ Steven Robbins, A. C. Evans, D. L. Collins, and S. Whitesides, ``Tuning and comparing spatial normalization methods,'' in Medical Image Computing and Computer-Assisted Intervention - MICCAI 2003, 6th International Conference, Montréal, Canada, November 15-18, 2003, Proceedings, Part II (R. E. Ellis and T. M. Peters, eds.), vol. 2879 of Lecture Notes in Computer Science, pp. 910-917, Springer, 2003.

32

*. M. M. Chakravarty, G. Bertrand, M. Descoteaux, A. F. Sadikot, and D. L. Collins, ``The creation of a brain atlas for image guided neurosurgery using serial histological data,'' vol. 2879 of Lecture Notes in Computer Science, (Montreal, Que., Canada), p. 343, Springer Verlag, Heidelberg, D-69121, Germany, 2003.

33

$\dagger$ Maxime Descoteaux, D. L. Collins, and K. Siddiqi, ``Geometric flows for segmenting vasculature in mri: Theory and validation,'' in Medical Image Computing and Computer-Assisted Intervention, MICCAI 2004, 7th International conference (C. Barillot, D. Haynor, and P. Hellier, eds.), vol. 3216 of Lecture Notes in Computer Science, (Saint-Malo, France), p. 500, Springer Verlag, Heidelberg, D-69121, Germany, 2004.

34

*. S. Duchesne, N. Bernasconi, A. Bernasconi, and D. L. Collins, ``Temporal lobe epilepsy surgical outcome prediction,'' in Medical Image Computing and Computer-Assisted Intervention, MICCAI 2004, 7th International conference (C. Barillot, D. Haynor, and P. Hellier, eds.), vol. Vol.2 of Medical Image Computing and Computer-Assisted Intervention - MICCAI 2004. 7th International Conference. Proceedings. (Lecture Notes in Comput. Sci. Vol.3217), (Saint-Malo, France), p. 696, Springer-Verlag, 2004.

35

*. I. Reinertsen, M. Descoteaux, S. Drouin, K. Siddiqi, and D. L. Collins, ``Vessel driven correction of brain shift,'' in Medical Image Computing and Computer-Assisted Intervention, MICCAI 2004, 7th International conference (C. Barillot, D. Haynor, and P. Hellier, eds.), vol. 3217 of Lecture Notes in Computer Science, (Saint-Malo, France), p. 208, Springer Verlag, Heidelberg, D-69121, Germany, 2004.

36

*. M. M. Chakravarty, A. Sadikot, J. Germann, G. Bertrand, and D. L. Collins, ``Anatomical and electrophysiological validation of an atlas for neurosurgical planning,'' in Medical Image Computing and Computer-Assisted Intervention, MICCAI 2005, 8th International conference (J. S. Duncan and G. Gerig, eds.), vol. Vol.2 of Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005. 8th International Conference. Proceedings. (Lecture Notes in Comput. Sci. Vol.3750), (Palm Springs, USA), pp. 394-401, Springer-Verlag, 2005.

37

*. S. Duchesne, A. Caroli, C. Geroldi, G. Frisoni, and D. L. Collins, ``Predicting clinical variable from mri features: Application to mmse in mci,'' in Medical Image Computing and Computer-Assisted Intervention, MICCAI 2005, 8th International conference (J. S. Duncan and G. Gerig, eds.), vol. Vol.1 of Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005. 8th International Conference. Proceedings. (Lecture Notes in Comput. Sci. Vol.3749), (Palm Springs, USA), pp. 392-399, Springer-Verlag, 2005.

38

*. M. Toews, D. L. Collins, and T. Arbel, ``Maximum a posteriori local histogram estimation for image registration,'' in Medical Image Computing and Computer-Assisted Intervention, MICCAI 2005, 8th International conference (J. S. Duncan and G. Gerig, eds.), vol. Vol.2 of Medical Image Computing and Computer-Assisted Intervention - MICCAI 2005. 8th International Conference. Proceedings. (Lecture Notes in Comput. Sci. Vol.3750), (Palm Springs, USA), pp. 163-170, Springer-Verlag, 2005.

39

*. L. Fu, V. Fonov, G. B. Pike, A. C. Evans, and D. L. Collins, ``Automated analysis of multi site mri phantom data for the nihpd project,'' in MICCAI, vol. LNCS, (Copenhagen), pp. II-144, Springer, 2006.

40

*. B. Aubert-Broche, C. Grova, A. Reilhac, A. C. Evans, and D. L. Collins, ``Realistic simulated mri and spect databases - application to spect/mri registration evaluation,'' in MICCAI, vol. LNCS, (Copenhagen), pp. I-330, Springer, 2006.

41

*. M. M. Chakravarty, A. F. Sadikot, S. Mongia, G. Bertrand, and D. L. Collins, ``Toward a multi-modal atlas for neurosurgical planning,'' in MICCAI, vol. LNCS, (Copenhagen), pp. II-389, Springer, 2006.

42

*. G. Grabner, A. L. Janke, M. M. Budge, D. Smith, J. Pruessner, and D. L. Collins, ``Symmetric atlasing and model based segmentation: An application to the hippocampus in older adults,'' in MICCAI, vol. LNCS, (Copenhagen), pp. II-58, Springer, 2006.

43

M. Toews, D. L. Collins, and T. Arbel, ``A statistical parts-based appearance model of inter-subject variability,'' Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv, vol. 9, no. Pt 1, pp. 232-40, 2006.
Evaluation Studies Journal Article.

44

M. M. Chakravarty, B. Bedell, S. Zehntner, A. Evans, and D. L. Collins, ``Three-dimensional reconstruction of serial histological mouse brain sections,'' in Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on, (Paris), pp. 987-90, 2008.

45

M. M. Chakravarty, P. Rosa-Neto, S. Broadbent, A. Evans, and D. L. Collins, ``Development of fmri techniques for planning in functional neurosurgery for parkinsonÕs disease,'' in Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on, (Paris), pp. 1259-1262, 2008.

46

E. L. Gedamu, A. Gedamu, D. L. Arnold, and D. L. Collins, ``Mri inter-packet movement orrection for images acquires with non complementary data,'' in Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on, (Paris), pp. 416-419, 2008.